XmlmmCIF equivalent: phasing_MIR_der_refln
Data items in the PHASING_MIR_DER_REFLN category record details
about the calculated structure factors obtained in an MIR
phasing experiment.
This list may contain information from a number of different
derivatives; _phasing_MIR_der_refln.der_id indicates to which
derivative a given record corresponds. (A derivative in this
context does not necessarily equate with a data set; see the
definition of the PHASING_MIR_DER category for a more
thorough discussion of the meaning of derivative.)
It is not necessary for the data items describing the measured
value of F to appear in this list, as they will already have
been given in the PHASING_SET_REFLN category. However, these
items may also be listed here for completeness, if desired.
XmlmmCIF equivalent: phasing_MIR_der_refln/F_calc
The calculated value of the structure factor for this derivative,
in electrons.
XmlmmCIF equivalent: phasing_MIR_der_refln/F_calc_au
The calculated value of the structure factor for this derivative,
in arbitrary units.
XmlmmCIF equivalent: phasing_MIR_der_refln/F_meas
The measured value of the structure factor for this derivative,
in electrons.
XmlmmCIF equivalent: phasing_MIR_der_refln/F_meas_au
The measured value of the structure factor for this derivative,
in arbitrary units.
XmlmmCIF equivalent: phasing_MIR_der_refln/F_meas_sigma
The estimated standard deviation of
_phasing_MIR_der_refln.F_meas, in electrons.
XmlmmCIF equivalent: phasing_MIR_der_refln/F_meas_sigma_au
The estimated standard deviation of
_phasing_MIR_der_refln.F_meas_au, in arbitrary units.
XmlmmCIF equivalent: phasing_MIR_der_refln/HL_A_iso
The isomorphous Hendrickson-Lattman coefficient A~iso~ for this
reflection for this derivative.
-2.0 * (Fp~obs~^2^ + Fh~calc~^2^ - Fph~obs~^2^)
* Fp~obs~ * cos(alphah~calc~)
A~iso~ = -----------------------------------------------------------------------------
E^2^
E = (Fph~obs~ - Fp~obs~ - Fh~calc~)^2^ for centric reflections
= [(Fph~obs~ - Fp~obs~) * 2^1/2^ - Fh~calc~]^2^ for acentric reflections
Fp~obs~ = the observed structure factor amplitude of the native
Fph~obs~ = the observed structure factor amplitude of the derivative
Fh~calc~ = the calculated structure factor amplitude from the heavy atom model
alphah~calc~ = the calculated phase from the heavy atom model
XmlmmCIF equivalent: phasing_MIR_der_refln/HL_B_iso
The isomorphous Hendrickson-Lattman coefficient B~iso~ for this
reflection for this derivative.
-2.0 * (Fp~obs~^2^ + Fh~calc~^2^ - Fph~obs~^2^)
* Fp~obs~ * sin(alphah~calc~)
B~iso~ = ----------------------------------------------------------------------------------
E^2^
E = (Fph~obs~ - Fp~obs~ - Fh~calc~)^2^ for centric reflections
= [(Fph~obs~ - Fp~obs~) * 2^1/2^ - Fh~calc~]^2^ for acentric reflections
Fp~obs~ = the observed structure factor amplitude of the native
Fph~obs~ = the observed structure factor amplitude of the derivative
Fh~calc~ = the calculated structure factor amplitude from the heavy atom model
alphah~calc~ = the phase calculated from the heavy atom model
XmlmmCIF equivalent: phasing_MIR_der_refln/HL_C_iso
The isomorphous Hendrickson-Lattman coefficient C~iso~ for this
reflection for this derivative.
-Fp~obs~^2^ * [sin(alphah~calc~)^2^
- cos(alphah~calc~)^2^]
C~iso~ = ------------------------------------------------------------------------------------
E^2^
E = (Fph~obs~ - Fp~obs~ - Fh~calc~)^2^ for centric reflections
= [(Fph~obs~ - Fp~obs~) * 2^1/2^ - Fh~calc~]^2^ for acentric reflections
Fp~obs~ = the observed structure factor amplitude of the native
Fph~obs~ = the observed structure factor amplitude of the derivative
Fh~calc~ = the calculated structure factor amplitude from the heavy atom model
alphah~calc~ = the phase calculated from the heavy atom model
XmlmmCIF equivalent: phasing_MIR_der_refln/HL_D_iso
The isomorphous Hendrickson-Lattman coefficient D~iso~ for this
reflection for this derivative.
-2.0 * Fp~obs~^2^ * sin(alphah~calc~)^2^
* cos(alphah~calc~)^2^
D~iso~ = ------------------------------------------------------------------------------------
E^2^
E = (Fph~obs~ - Fp~obs~ - Fh~calc~)^2^ for centric reflections
= [(Fph~obs~ - Fp~obs~) * 2^1/2^ - Fh~calc~]^2^ for acentric reflections
Fp~obs~ = the observed structure factor amplitude of the native
Fph~obs~ = the observed structure factor amplitude of the derivative
Fh~calc~ = the calculated structure factor amplitude from the heavy atom model
alphah~calc~= the phase calculated from the heavy atom model
XmlmmCIF equivalent: phasing_MIR_der_refln/phase_calc
The calculated value of the structure-factor phase, based on the
heavy atom model, for this derivative, in degrees.
XmlmmCIF equivalent: phasing_MIR_der_refln/index_h
Miller index h for this reflection for this derivative.
XmlmmCIF equivalent: phasing_MIR_der_refln/index_k
Miller index k for this reflection for this derivative.
XmlmmCIF equivalent: phasing_MIR_der_refln/index_l
Miller index l for this reflection for this derivative.
XmlmmCIF equivalent: phasing_MIR_der_refln/der_id
This data item is a pointer to _phasing_MIR_der.id in the
PHASING_MIR_DER category.
XmlmmCIF equivalent: phasing_MIR_der_refln/set_id
This data item is a pointer to _phasing_set.id in the
PHASING_SET category.